Tutorials and protocols from PAF
Tutorial for interpretation of quantitative analysis (commented version)
Links
- Uniprot – the reference protein knowledgebase
- PUMBA – OUR gel migration database – useful for evaluating your Western Blot results
- Phosphosite plus : most comprehensive PTM database
- Gingras lab protocols – useful for IPs
- Reprint (ex-CRAPOME) – database of unspecific proteins in interactomics
- ProteomicsDB – a large scale proteomics database covering several organisms
- StringDB – protein protein interactions of many types
- ProteomeXchange – proteomics data repository
- Scaffold – software for post-processing of proteomics identification data
- MaxQuant – software (free) for proteomics quantification data
- Spectronaut – software for DIA quantification data
- Proteome Discoverer – software for DDA quantification data
- Perseus – software (free) for post-processing of proteomics data
- Compass – software for Jess data analysis
- Simple Western validated antibodies – find antibodies validated for Simple Western