{"id":201,"date":"2012-10-24T20:20:34","date_gmt":"2012-10-24T18:20:34","guid":{"rendered":"http:\/\/wp.unil.ch\/hardtkelab\/?page_id=201"},"modified":"2022-10-10T08:24:16","modified_gmt":"2022-10-10T06:24:16","slug":"root-system-growth-architecture","status":"publish","type":"page","link":"https:\/\/wp.unil.ch\/hardtkelab\/research-projects\/retired-projects\/root-system-growth-architecture\/","title":{"rendered":"Root System Adaptive Microevolution"},"content":{"rendered":"<p style=\"text-align: justify\"><a href=\"https:\/\/wp.unil.ch\/hardtkelab\/files\/2012\/09\/root_sys_var.gif\"><img alt=\"\" loading=\"lazy\" decoding=\"async\" class=\"size-full wp-image-133 alignleft\" src=\"https:\/\/wp.unil.ch\/hardtkelab\/files\/2012\/09\/root_sys_var.gif\" alt=\"\" width=\"550\" height=\"209\" srcset=\"https:\/\/wp.unil.ch\/hardtkelab\/files\/2012\/09\/root_sys_var.gif 550w, https:\/\/wp.unil.ch\/hardtkelab\/files\/2012\/09\/root_sys_var-300x113.gif 300w\" sizes=\"auto, (max-width: 550px) 100vw, 550px\" \/><\/a><\/p>\n<p style=\"text-align: justify\">How root system architecture is determined by intrinsic developmental programs is one of our favorite subjects. It is intricately linked to&nbsp;plant hormone signaling, and we like to exploit natural genetic variation as well as targeted mutant approaches to find and characterize regulators of root growth. <strong><em>In the ecological-evolutionary context, we are particularly interested in molecular mechanisms that confer root adaptation to acidic soil.<\/em><\/strong> Soil pH is particularly important for plant performance, since it is directly related to&nbsp;nutrient accessibility. Optimal soil pH for plant growth typically ranges from ca.&nbsp;5.5-6.5, however, most plants manage on a wider range (ca.&nbsp;5.0-7.5). Yet&nbsp;some plant species have evolved strategies to cope with the different aspects of excess soil acidity (pH &lt; 5.0), notably aluminium ion&nbsp;toxicity, low phosphate availability and proton&nbsp;toxicity. However, the molecular basis for such&nbsp;adaptations is largely unknown, preventing its exploitation&nbsp;for targeted crop adaptation to acidic soil. For sustainable agriculture, this would be important, because in the agro-ecological context, soil acidification&nbsp;(for example&nbsp;as a result of sustained ammonium fertilization or industrial pollutants such as sulphur dioxide&nbsp;emissions) is a major problem that limits crop range and contributes to the effective shrinking of available agricultural surface.&nbsp;Find out more about our resesarch on root system development and its adaptive value in the following publications:<\/p>\n<p style=\"text-align: justify\"><a href=\"https:\/\/www.cell.com\/current-biology\/abstract\/S0960-9822(12)00991-8\" target=\"_blank\" rel=\"noopener noreferrer\">Bojan&nbsp;Gujas,&nbsp;Carlos&nbsp;Alonso-Blanco&nbsp;and&nbsp;Christian S.&nbsp;Hardtke (2012):&nbsp;<strong>Natural Arabidopsis <em>brx<\/em> loss of function alleles confer root adaptation to acidic soil. <span style=\"color: #ff9900\"><em>Current Biology<\/em>,<\/span><\/strong>&nbsp;Vol. 22: pp. 1962-1968.<\/a><\/p>\n<p style=\"text-align: justify\"><a href=\"https:\/\/rstb.royalsocietypublishing.org\/content\/367\/1595\/1552.abstract\" target=\"_blank\" rel=\"noopener noreferrer\">David Pacheco-Villalobos and Christian S. Hardtke (2012):&nbsp;<strong>Natural genetic variation of root system architecture from Arabidopsis to Brachypodium: towards adaptive value.&nbsp;<\/strong><span style=\"color: #ff9900\"><strong><em>Philosophical Transactions of the Royal Society B<\/em><\/strong>,<\/span> Vol. 367: pp. 1552-1558.<\/a><\/p>\n<p style=\"text-align: justify\"><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/B9780123814661000134\" target=\"_blank\" rel=\"noopener noreferrer\">Christian S. Hardtke and Kaisa Nieminen (2011):&nbsp;<strong>Advances in identifying and exploiting natural genetic variation.<\/strong>&nbsp;<span style=\"color: #ff9900\"><strong><em>Plant biotechnology and agriculture: Prospects for the 21st century<\/em><\/strong>,<\/span> pp. 195-205.<\/a><\/p>\n<p style=\"text-align: justify\"><a href=\"https:\/\/www.pnas.org\/content\/107\/18\/8475.abstract?sid=34833d77-26ea-4f29-aa10-985a20dd068d\" target=\"_blank\" rel=\"noopener noreferrer\">Julien Beuchat, Shuwei Li, Laura Ragni, Chikako Shindo, Michael H. Kohn and Christian S. Hardtke (2010):<strong>&nbsp;A hyperactive QTL allele of Arabidopsis BRX contributes to natural variation in root growth vigor.<\/strong>&nbsp;<span style=\"color: #ff9900\"><em><strong>Proceedings of the National Academy of Sciences U.S.A.<\/strong><\/em>,<\/span> Vol. 107: pp. 8475-8480.<\/a><\/p>\n<p style=\"text-align: justify\"><a href=\"https:\/\/www.plantphysiol.org\/content\/149\/4\/1917.abstract?sid=674386db-eb9b-44d2-a01b-da0425a5e0a1\" target=\"_blank\" rel=\"noopener noreferrer\">Americo Rodrigues, Julia Santiago, Silvia Rubio, Angela Saez, Karen S. Osmont, Jose Gadea, Christian S. Hardtke and Pedro L. Rodriguez (2009):&nbsp;<strong>The short-rooted phenotype of the <em>brevis radix<\/em> mutant partly reflects root ABA hypersensitivity.<\/strong>&nbsp;<span style=\"color: #ff9900\"><strong><em>Plant Physiology<\/em><\/strong>,<\/span> Vol. 149: pp. 1917-28.<\/a><\/p>\n<p style=\"text-align: justify\"><a href=\"https:\/\/onlinelibrary.wiley.com\/doi\/10.1111\/j.1469-8137.2008.02553.x\/abstract\" target=\"_blank\" rel=\"noopener noreferrer\">Chikako Shindo, Giorgina Bernasconi and Christian S. Hardtke (2008):&nbsp;<strong>Intra-specific competition reveals conditional fitness effects of single gene polymorphism at the Arabidopsis root growth regulator <em>BRX<\/em>.<\/strong>&nbsp;<span style=\"color: #ff9900\"><em><strong>New Phytologist<\/strong><\/em>,<\/span> Vol. 180: pp. 71-80.<\/a><\/p>\n<p style=\"text-align: justify\"><a href=\"https:\/\/www.annualreviews.org\/doi\/abs\/10.1146\/annurev.arplant.58.032806.104006?prevSearch=authors%253A%2528hardtke%2529&amp;searchHistoryKey=\" target=\"_blank\" rel=\"noopener noreferrer\">Karen S. Osmont, Richard Sibout and Christian S. Hardtke (2007):<em><em>&nbsp;<\/em><\/em><strong>Hidden Branches: Developments in Root System Architecture.<\/strong><em><em>&nbsp;<span style=\"color: #ff9900\"><strong>Annual Review of Plant Biology<\/strong><\/span><\/em><span style=\"color: #ff9900\">,<\/span><\/em>&nbsp;Vol. 58: pp. 93-113<\/a><em><a href=\"https:\/\/www.annualreviews.org\/doi\/abs\/10.1146\/annurev.arplant.58.032806.104006?prevSearch=authors%253A%2528hardtke%2529&amp;searchHistoryKey=\" target=\"_blank\" rel=\"noopener noreferrer\">.<\/a><em><br \/>\n<\/em><\/em><\/p>\n<p style=\"text-align: justify\"><a href=\"https:\/\/aob.oxfordjournals.org\/content\/99\/6\/1043.full\" target=\"_blank\" rel=\"noopener noreferrer\">Chikako Shindo, Giorgina Bernasconi and Christian S. Hardtke (2007):<em>&nbsp;<\/em><strong>Natural genetic variation in Arabidopsis: tools, traits and prospects for Evolutionary Ecology.<\/strong>&nbsp;<span style=\"color: #ff9900\"><em><strong>Annals of Botany<\/strong><\/em>,<\/span> Vol. 99: pp. 1043-1054.<\/a><\/p>\n<p style=\"text-align: justify\"><a href=\"https:\/\/www.nature.com\/nature\/journal\/v443\/n7110\/full\/nature05130.html\" target=\"_blank\" rel=\"noopener noreferrer\">C\u00e9line F. Mouchel, Karen S. Osmont and Christian S. Hardtke (2006):&nbsp;<strong><em>BRX<\/em>&nbsp;mediates feedback between brassinosteroid levels and auxin signalling in root growth.<\/strong>&nbsp;<span style=\"color: #ffcc00\"><span style=\"color: #ff9900\"><strong><em>Nature<\/em><\/strong><\/span>,<\/span> Vol. 443: pp. 458-461.<\/a><\/p>\n<p style=\"text-align: justify\"><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S1369526605001603\" target=\"_blank\" rel=\"noopener noreferrer\">Christian S. Hardtke (2006):&nbsp;<strong>Root development &#8211; branching into novel spheres.<\/strong>&nbsp;<span style=\"color: #ff9900\"><strong><em>Current Opinions in Plant Biology<\/em><\/strong>,<\/span> Vol. 9: pp. 66-71.<\/a><\/p>\n<p style=\"text-align: justify\"><a href=\"https:\/\/genesdev.cshlp.org\/content\/18\/6\/700.abstract?sid=a530448e-fe75-4a44-b84c-0bd1e07fa1ad\" target=\"_blank\" rel=\"noopener noreferrer\">C\u00e9line F. Mouchel, Georgette C. Briggs and Christian S. Hardtke (2004):&nbsp;<strong>Natural genetic variation in Arabidopsis identifies&nbsp;<em>BREVIS RADIX<\/em>, a novel regulator of cell proliferation and elongation in the root.<\/strong>&nbsp;<span style=\"color: #ff9900\"><strong><em>Genes &amp; Development<\/em><\/strong>,<\/span> Vol. 18: pp. 700-714.<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>How root system architecture is determined by intrinsic developmental programs is one of our favorite subjects. It is intricately linked to&nbsp;plant hormone signaling, and we like to exploit natural genetic &hellip; <\/p>\n","protected":false},"author":1001,"featured_media":0,"parent":1217,"menu_order":1,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_seopress_robots_primary_cat":"","_seopress_titles_title":"","_seopress_titles_desc":"","_seopress_robots_index":"","_seopress_analysis_target_kw":"","footnotes":""},"class_list":["post-201","page","type-page","status-publish"],"_links":{"self":[{"href":"https:\/\/wp.unil.ch\/hardtkelab\/wp-json\/wp\/v2\/pages\/201","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/wp.unil.ch\/hardtkelab\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/wp.unil.ch\/hardtkelab\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/wp.unil.ch\/hardtkelab\/wp-json\/wp\/v2\/users\/1001"}],"replies":[{"embeddable":true,"href":"https:\/\/wp.unil.ch\/hardtkelab\/wp-json\/wp\/v2\/comments?post=201"}],"version-history":[{"count":0,"href":"https:\/\/wp.unil.ch\/hardtkelab\/wp-json\/wp\/v2\/pages\/201\/revisions"}],"up":[{"embeddable":true,"href":"https:\/\/wp.unil.ch\/hardtkelab\/wp-json\/wp\/v2\/pages\/1217"}],"wp:attachment":[{"href":"https:\/\/wp.unil.ch\/hardtkelab\/wp-json\/wp\/v2\/media?parent=201"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}