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September 2024

Newsletter

DBC News is a monthly publication that seeks to inform first and foremost faculty members, researchers and students. It also reaches out to a wider community - Department of Computational Biology partners, visiting faculty and friends.

Alongside the Department's website it is a complementary means of keeping abreast of the Department's rich and diversified scientific activities - visiting faculty, exceptional conferences, publications, awards, appointments, calls for papers and research, ...

WELCOME

The whole DBC extends the warmest of welcomes to new members.


Dr. Sonja Lehtinen

Dr. Lehtinen is joining the DBC as a Tenure-track assistant professor.

My group is interested in how ecological and evolutionary mechanisms shape the structure and diversity of bacterial populations and, in particular, the dynamics of public health relevant traits, such as antibiotic resistance.

We use mathematical and statistical modelling, and genomic and surveillance data - both publicly available and collected as part of our own studies - to develop evolutionary and epidemiological insights. We focus on species that share a similar lifestyle: mostly commensal but occasionally pathogenic (e.g. Streptococcus pneumoniae, Escherichia coli) and of high clinical relevance.

Before my arrival here, I was an SNF PRIMA group leader at ETH Zürich. Outside of work, I enjoy running, hiking, cold water swimming and improv theatre.

Learn more about her research

DEPARTURE

Many thanks for your contribution to the DBC throughout these years. We wish you great success in your future endeavours.
Yannis Nevers
Postdoc, Group Dessimoz

INFOS

Genopode Retreat - September 5&6


This year, the "Génopode retreat" will take place on September 5&6 in Leysin. Make sure to be on time and do not hesitate to contact Corinne Dentan for any information. Check the programm

17th Lausanne Comp Bio Meeting


When: September 10th, 2024 from 10 am to 2 pm

Where: CHUV - Agora

The goal of this meeting series is to bring together researchers from UNIL, CHUV, EPFL and industry, who are active in the field of Computational and Quantitative Biology. The meetings are sponsored by the Department of Computational Biology at UNIL. Learn more and registration

Reconstructing the human past: using ancient and modern genomics - September 17-20th


Combining genome-wide data from ancient and modern populations opens new windows into the past and, importantly, their integration with archaeological evidence and historical records elucidates aspects of human history and cultural evolution of past societies. Learn more

2nd Alma Dal Co memorial symposium - November 15th


Building on last year's symposium, also this year we will commemorate our late colleague and friend Alma Dal Co, who was a professor at the Department of Computational Biology (DBC) of UNIL.

In this 2nd Alma Dal Co memorial symposium six scientists who knew Alma will talk about their science and how it relates to her legacy. Registration

EDUCATION AND OUTREACH

The astonishing clownfish

Clownfish evolution is so extraordinary that it can only be described with the voice of David Attenborough. The group Salamin is studying their genomes and running computer simulations to try to understand their evolution.
Watch the video
For more videos, visit the DBC YouTube channel and subscribe

EXPLORE MORE...

For more Research news and infos on DBC Events, please check out the DBC Website

Check out
CIG News
SIB News
Skills for Scientists

All the events of the APNS here

RESEARCH HIGHLIGHTS

What follows is a small sampling of recently published research across the department — for a more complete list of publications, visit PubMed. If there is a paper you would like to see highlighted in the next issue of the newsletter, please email us.
A look beyond the QR code of SNARE proteins - With Deepak Yadav , Aysima Hacisuleyman , Mykola Dergai, Dany Khalifeh , Dirk Fasshauer

Mitoclone2: an R package for elucidating clonal structure in single-cell RNA-sequencing data using mitochondrial variants - With Ahrmad Annan

pyTWMR: Transcriptome-Wide Mendelian Randomization in Python - With Kaido Lepik

Publisher Correction: Understanding the genetic complexity of puberty timing across the allele frequency spectrum - With Eleonora Porcu

Explore more...

JOB OPENING

Software Developer - Computational - Location : Saffron Walden, United Kingdom

Bioinformatician Spatial Single-Cell Omics - Location : Leuven, Belgium

ALUMNI SPOTLIGHT

Are you an alumnus or former employee of the department? Email us your news and updates to include in an upcoming newsletter!