{"id":1555,"date":"2026-08-27T15:07:33","date_gmt":"2026-08-27T13:07:33","guid":{"rendered":"https:\/\/wp.unil.ch\/cvmr\/?page_id=1555"},"modified":"2026-08-27T16:04:27","modified_gmt":"2026-08-27T14:04:27","slug":"git","status":"publish","type":"page","link":"https:\/\/wp.unil.ch\/cvmr\/git\/","title":{"rendered":"GIT"},"content":{"rendered":"\n<p class=\"wp-block-paragraph\"><\/p>\n\n\n\n<p class=\"wp-block-paragraph\">Open-source repositories from the Translational Magnetic Resonance Research Lab supporting methodological developments in MRI, computational imaging, and quantitative image analysis.\u00a0Check our repositories here: <a href=\"https:\/\/gitlab.com\/chuv-tmrr\" target=\"_blank\" rel=\"noopener\">https:\/\/gitlab.com\/chuv-tmrr<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><\/p>\n\n\n\n<h2 class=\"wp-block-heading\"><a href=\"https:\/\/gitlab.com\/chuv-tmrr\/HydrOptiFrame\" target=\"_blank\" rel=\"noopener\">HydrOptiFrame<\/a><br><\/h2>\n\n\n\n<p class=\"wp-block-paragraph\">This repository contains code developed to implement the flexible framework for designing and optimizing water-excitation radio-frequency pulses, as described in Sieber et al. Magn. Reson. Med. 2025.<\/p>\n\n\n\n<figure class=\"wp-block-image size-full\"><img loading=\"lazy\" decoding=\"async\" width=\"711\" height=\"332\" src=\"https:\/\/wp.unil.ch\/cvmr\/files\/2026\/08\/hydroptiframe_optimization_loop.png\" alt=\"hydroptiframe optimization loop\" class=\"wp-image-1558\" srcset=\"https:\/\/wp.unil.ch\/cvmr\/files\/2026\/08\/hydroptiframe_optimization_loop.png 711w, https:\/\/wp.unil.ch\/cvmr\/files\/2026\/08\/hydroptiframe_optimization_loop-300x140.png 300w\" sizes=\"auto, (max-width: 711px) 100vw, 711px\" \/><\/figure>\n\n\n\n<h2 class=\"wp-block-heading\"><a href=\"https:\/\/gitlab.com\/chuv-tmrr\/HydrOptiFrame\"><\/a><a href=\"https:\/\/gitlab.com\/chuv-tmrr\/dict-trafo\" target=\"_blank\" rel=\"noopener\">PARMANav Dictionary Transformer<\/a><br><\/h2>\n\n\n\n<p class=\"wp-block-paragraph\">Framework for replacing traditional Extended Phase Graph simulations with transformer-based dictionary generation for quantitative cardiac MRI, predicting T1 and T2 values directly from acquisition timings<\/p>\n\n\n\n<figure class=\"wp-block-image size-large\"><img loading=\"lazy\" decoding=\"async\" width=\"1024\" height=\"381\" src=\"https:\/\/wp.unil.ch\/cvmr\/files\/2026\/08\/figure1_web-1024x381.png\" alt=\"figure1 web\" class=\"wp-image-1557\" srcset=\"https:\/\/wp.unil.ch\/cvmr\/files\/2026\/08\/figure1_web-1024x381.png 1024w, https:\/\/wp.unil.ch\/cvmr\/files\/2026\/08\/figure1_web-300x112.png 300w, https:\/\/wp.unil.ch\/cvmr\/files\/2026\/08\/figure1_web-768x285.png 768w, https:\/\/wp.unil.ch\/cvmr\/files\/2026\/08\/figure1_web.png 1200w\" sizes=\"auto, (max-width: 767px) 89vw, (max-width: 1000px) 54vw, (max-width: 1071px) 543px, 580px\" \/><\/figure>\n\n\n\n<h2 class=\"wp-block-heading\"><a href=\"https:\/\/gitlab.com\/chuv-tmrr\/HydrOptiFrame\"><\/a><a href=\"https:\/\/gitlab.com\/chuv-tmrr\/pmu-extraction\" target=\"_blank\" rel=\"noopener\">PMU Extraction<\/a><br><\/h2>\n\n\n\n<p class=\"wp-block-paragraph\">Extracts physiological signals (ECG, pulse oximetry, respiratory bellows, etc.) directly from Siemens .dat raw data without third-party software. These signals can be used for further cardiac trigger extraction and cardiac and respiratory binning in motion-resolved recontructions.<\/p>\n\n\n\n<figure class=\"wp-block-image size-full\"><img loading=\"lazy\" decoding=\"async\" width=\"1011\" height=\"638\" src=\"https:\/\/wp.unil.ch\/cvmr\/files\/2026\/08\/pmu_data.png\" alt=\"pmu data\" class=\"wp-image-1559\" srcset=\"https:\/\/wp.unil.ch\/cvmr\/files\/2026\/08\/pmu_data.png 1011w, https:\/\/wp.unil.ch\/cvmr\/files\/2026\/08\/pmu_data-300x189.png 300w, https:\/\/wp.unil.ch\/cvmr\/files\/2026\/08\/pmu_data-768x485.png 768w\" sizes=\"auto, (max-width: 767px) 89vw, (max-width: 1000px) 54vw, (max-width: 1071px) 543px, 580px\" \/><\/figure>\n","protected":false},"excerpt":{"rendered":"<p>Open-source repositories from the Translational Magnetic Resonance Research Lab supporting methodological developments in MRI, computational imaging, and quantitative image analysis.\u00a0Check our repositories here: https:\/\/gitlab.com\/chuv-tmrr HydrOptiFrame This repository contains code developed to implement the flexible framework for designing and optimizing water-excitation radio-frequency pulses, as described in Sieber et al. Magn. Reson. Med. 2025. PARMANav Dictionary Transformer &hellip; <\/p>\n<p class=\"link-more\"><a href=\"https:\/\/wp.unil.ch\/cvmr\/git\/\" class=\"more-link\">Continue reading<span class=\"screen-reader-text\"> &#8220;GIT&#8221;<\/span><\/a><\/p>\n","protected":false},"author":1002659,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_seopress_titles_title":"","_seopress_titles_desc":"","_seopress_robots_index":"","_seopress_robots_follow":"","_seopress_robots_imageindex":"","_seopress_robots_snippet":"","_seopress_robots_primary_cat":"","_seopress_robots_breadcrumbs":"","_seopress_robots_freeze_modified_date":"","_seopress_robots_custom_modified_date":"","_seopress_robots_canonical":"","_seopress_social_fb_title":"","_seopress_social_fb_desc":"","_seopress_social_fb_img":"","_seopress_social_fb_img_attachment_id":0,"_seopress_social_fb_img_width":0,"_seopress_social_fb_img_height":0,"_seopress_social_twitter_title":"","_seopress_social_twitter_desc":"","_seopress_social_twitter_img":"","_seopress_social_twitter_img_attachment_id":0,"_seopress_social_twitter_img_width":0,"_seopress_social_twitter_img_height":0,"_seopress_redirections_value":"","_seopress_redirections_enabled":"","_seopress_redirections_enabled_regex":"","_seopress_redirections_logged_status":"","_seopress_redirections_param":"","_seopress_redirections_type":0,"_seopress_analysis_target_kw":"","_seopress_news_disabled":"","_seopress_video_disabled":"","_seopress_video":[],"_seopress_pro_schemas_manual":[],"_seopress_pro_rich_snippets_disable_all":"","_seopress_pro_rich_snippets_disable":[],"_seopress_pro_schemas":[],"footnotes":""},"class_list":["post-1555","page","type-page","status-publish"],"_links":{"self":[{"href":"https:\/\/wp.unil.ch\/cvmr\/wp-json\/wp\/v2\/pages\/1555","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/wp.unil.ch\/cvmr\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/wp.unil.ch\/cvmr\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/wp.unil.ch\/cvmr\/wp-json\/wp\/v2\/users\/1002659"}],"replies":[{"embeddable":true,"href":"https:\/\/wp.unil.ch\/cvmr\/wp-json\/wp\/v2\/comments?post=1555"}],"version-history":[{"count":5,"href":"https:\/\/wp.unil.ch\/cvmr\/wp-json\/wp\/v2\/pages\/1555\/revisions"}],"predecessor-version":[{"id":1568,"href":"https:\/\/wp.unil.ch\/cvmr\/wp-json\/wp\/v2\/pages\/1555\/revisions\/1568"}],"wp:attachment":[{"href":"https:\/\/wp.unil.ch\/cvmr\/wp-json\/wp\/v2\/media?parent=1555"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}